publications

publications by categories in reversed chronological order. generated by jekyll-scholar.

2026

  1. Article
    A high-coverage Neandertal genome from the Altai Mountains reveals population structure among Neandertals
    Diyendo Massilani, Stéphane Peyrégne, Leonardo NM Iasi, and 17 more authors
    Proceedings of the National Academy of Sciences, 2026
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2025

  1. Article
    Earliest modern human genomes constrain timing of Neanderthal admixture
    Arev P Sümer, Hélène Rougier, Vanessa Villalba-Mouco, and 42 more authors
    Nature, 2025
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  2. Method
    Resolving the source of branch length variation in the Y chromosome phylogeny
    Yaniv Swiel, Janet Kelso, and Stéphane Peyrégne
    Genome Biology, 2025
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  3. Article
    Pleistocene chronology and history of hominins and fauna at Denisova Cave
    Zenobia Jacobs, Elena I Zavala, Bo Li, and 15 more authors
    Nature Communications, 2025
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  4. Article
    An early East Asian lineage with unexpectedly low Denisovan ancestry
    Jiaqi Yang, Leonardo NM Iasi, Qiaomei Fu, and 4 more authors
    Current Biology, 2025
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2024

  1. Review
    More than a decade of genetic research on the Denisovans
    Stéphane Peyrégne, Viviane Slon, and Janet Kelso
    Nature Reviews Genetics, 2024
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2023

  1. Method
    KIN: a method to infer relatedness from low-coverage ancient DNA
    Divyaratan Popli, Stéphane Peyrégne, and Benjamin M Peter
    Genome Biology, 2023
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2022

  1. Article
    The evolutionary history of human spindle genes includes back-and-forth gene flow with Neandertals
    Stéphane Peyrégne, Janet Kelso, Benjamin M Peter, and 1 more author
    eLife, 2022
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  2. Article
    Genetic insights into the social organization of Neanderthals
    Laurits Skov, Stéphane Peyrégne, Divyaratan Popli, and 32 more authors
    Nature, 2022
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2020

  1. Article
    Multiple Genomic Events Altering Hominin SIGLEC Biology and Innate Immunity Predated the Common Ancestor of Humans and Archaic Hominins
    Naazneen Khan, Marc Manuel, Stéphane Peyrégne, and 6 more authors
    Genome biology and evolution, 2020
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  2. Article
    A high-coverage Neandertal genome from Chagyrskaya Cave
    Fabrizio Mafessoni, Steffi Grote, Cesare Filippo, and 8 more authors
    Proceedings of the National Academy of Sciences, 2020
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  3. Method
    AuthentiCT: a model of ancient DNA damage to estimate the proportion of present-day DNA contamination
    Stéphane Peyrégne and Benjamin M Peter
    Genome biology, 2020
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  4. Review
    Present-Day DNA Contamination in Ancient DNA Datasets
    Stéphane Peyrégne and Kay Prüfer
    BioEssays, 2020
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  5. Article
    A late Neanderthal tooth from northeastern Italy
    Matteo Romandini, Gregorio Oxilia, Eugenio Bortolini, and 8 more authors
    Journal of Human Evolution, 2020
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2019

  1. Article
    Recent Adaptive Acquisition by African Rainforest Hunter-Gatherers of the Late Pleistocene Sickle-Cell Mutation Suggests Past Differences in Malaria Exposure
    Guillaume Laval, Stéphane Peyrégne, Nora Zidane, and 5 more authors
    The American Journal of Human Genetics, 2019
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  2. Article
    Nuclear DNA from two early Neandertals reveals 80,000 years of genetic continuity in Europe
    Stéphane Peyrégne, Viviane Slon, Fabrizio Mafessoni, and 8 more authors
    Science Advances, 2019
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  3. Article
    A genetic analysis of the Gibraltar Neanderthals
    Lukas Bokelmann, Mateja Hajdinjak, Stéphane Peyrégne, and 8 more authors
    Proceedings of the National Academy of Sciences, 2019
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2018

  1. Article
    The genome of the offspring of a Neanderthal mother and a Denisovan father
    Viviane Slon, Fabrizio Mafessoni, Benjamin Vernot, and 8 more authors
    Nature, 2018
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2017

  1. Article
    A high-coverage Neandertal genome from Vindija Cave in Croatia
    Kay Prüfer, Cesare Filippo, Steffi Grote, and 8 more authors
    Science, 2017
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  2. Method
    Detecting ancient positive selection in humans using extended lineage sorting
    Stéphane Peyrégne, Michael James Boyle, Michael Dannemann, and 1 more author
    Genome research, 2017
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